Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016374.1_569_858_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

569 - 858

Intron Length:

290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGGGTGTG

5'SS Class:

major

3'SS Sequence:

CCCAACCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

CCATCCTTAATT

Flanking Amino Acid:

GLGAARAPLHRLLHRLHRLH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

63.5

42.9

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

61.7

0.26

0.9

30.7

Minor 5ss

29.9

-2.3

3.5

39.9

46.1

Minor BPS

76.9

0.92

1.2

80.42

41.9

Associated Gene:

Gene:

CRELD1

Ensembl Gene ID:

ENSAPLG00000021797

Chromosome:

PEDO01016374.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043878

167 - 1690

1524