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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016389.1_5956_6190_R

Intron Information:

Intron Rank:

141807

Intron Class:

major

Intron Phase:

Intron Coordinates:

5956 - 6190

Intron Length:

235

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCACC

5'SS Class:

strong_major

3'SS Sequence:

CATTCCTCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTCCAT

U12 Branch Point Sequence:

CATCCCAGAGCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

74.9

35.3

Major BPS

68.5

0.46

1.2

78.5

35.1

Major PPT

79.2

0.66

0.8

69.9

36.2

Minor 5ss

35.2

-1.7

2.8

43.7

Minor BPS

44.5

-0.4

1.9

55.58

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023631

Chromosome:

PEDO01016389.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020267

1684 - 6441

4758

ENSAPLT00000044409

3611 - 7914

4304

ENSAPLT00000018056

794 - 7914

7121

ENSAPLT00000041627

794 - 7914

7121

ENSAPLT00000032512

794 - 7914

7121

ENSAPLT00000023509

4538 - 7914

3377