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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016391.1_1216_1698_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1216 - 1698

Intron Length:

483

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAATAAA

5'SS Class:

strong_major

3'SS Sequence:

GTTCTCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAC

U12 Branch Point Sequence:

AGCTGACAAACT

Flanking Amino Acid:

ITHQNCAGCCVVCEPGTYSP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

78.3

30.5

Major BPS

57.5

0.19

1.1

48.8

38.1

Major PPT

86.2

0.81

0.8

80.7

31.3

Minor 5ss

34.5

-1.8

2.8

38.6

41.7

Minor BPS

38.7

-0.7

2.3

56.92

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028008

Chromosome:

PEDO01016391.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019700

1021 - 1796

776