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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016393.1_1361_1618_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

1361 - 1618

Intron Length:

258

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTGCG

5'SS Class:

major

3'SS Sequence:

CTTCTCTTCGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CCCCCCTCACCG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

59.9

39.3

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

84.5

0.78

0.7

25.3

Minor 5ss

29.8

-2.3

3.1

38.2

40.5

Minor BPS

44.7

-0.5

1.9

44.41

47.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026687

Chromosome:

PEDO01016393.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044251

21 - 1772

1752