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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016399.1_225_729_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

225 - 729

Intron Length:

505

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTTGGCCGG

5'SS Class:

weak_major

3'SS Sequence:

AAACCAGGGCCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCAAAC

U12 Branch Point Sequence:

GGGACCTGGAGC

Flanking Amino Acid:

LDPFLFSIGRRWTQVLTSSP

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.4

0.08

1.3

37.5

47.3

Major BPS

47.4

-0.1

50.7

32.1

Major PPT

46.8

-0.1

1.1

32.4

40.4

Minor 5ss

31.8

-2.1

3.1

31.3

42.5

Minor BPS

44.6

-0.4

1.8

48.9

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023417

Chromosome:

PEDO01016399.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035235

162 - 3310

3149