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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016399.1_822_898_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

822 - 898

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTCAGGGCA

5'SS Class:

major

3'SS Sequence:

CTCTCTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGCAAT

U12 Branch Point Sequence:

CAATCCTCCACC

Flanking Amino Acid:

LDCNWELQRTTWIKSIGQWI

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.1

0.33

1.3

60.4

38.8

Major BPS

61.8

0.29

1.4

70.7

42.6

Major PPT

85.4

0.8

0.7

80.1

25.2

Minor 5ss

26.6

-2.7

3.3

30.9

36.3

Minor BPS

49.6

-0

60.81

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023417

Chromosome:

PEDO01016399.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035235

162 - 3310

3149