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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016439.1_1127_6560_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1127 - 6560

Intron Length:

5434

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAAACTG

5'SS Class:

major

3'SS Sequence:

CGTGTCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAG

U12 Branch Point Sequence:

ACCCCCCTGAGG

Flanking Amino Acid:

GKNAGKQPLKGDSWGIFAFL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.5

0.37

1.3

59.7

45.1

Major BPS

-0.1

1.5

42.6

40.4

Major PPT

76.4

0.59

0.9

69.5

36.8

Minor 5ss

30.3

-2.2

3.1

39.3

45.9

Minor BPS

42.8

-0.7

1.9

42.9

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025417

Chromosome:

PEDO01016439.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047415

21 - 7146

7126