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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016459.1_1400_2270_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1400 - 2270

Intron Length:

871

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCTGCTG

5'SS Class:

major

3'SS Sequence:

GCTGTGCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAACAC

U12 Branch Point Sequence:

GCCCCCATAACA

Flanking Amino Acid:

QLLGTPGSSQSPWQRLVKRM

Intron Amino Acid Position:

327

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.2

0.34

1.1

53.4

Major BPS

52.3

0.06

1.1

61.1

34.5

Major PPT

65.5

0.35

57.1

38.8

Minor 5ss

27.9

-2.5

3.5

38.3

46.7

Minor BPS

0.19

1.7

62.7

Associated Gene:

Gene:

CHEK1

Ensembl Gene ID:

ENSAPLG00000014973

Chromosome:

PEDO01016459.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015624

625 - 4853

4229