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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016459.1_3232_4045_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3232 - 4045

Intron Length:

814

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGCACG

5'SS Class:

major

3'SS Sequence:

GCCCTGCCGGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

GCTGCCCTAACG

Flanking Amino Acid:

GVVLTAMLAGELPWDQPSDS

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

62.3

43.9

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

59.3

0.21

53.5

36.7

Minor 5ss

32.9

-2

3.1

39.9

45.9

Minor BPS

54.7

0.01

1.9

60.76

46.6

Associated Gene:

Gene:

CHEK1

Ensembl Gene ID:

ENSAPLG00000014973

Chromosome:

PEDO01016459.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015624

625 - 4853

4229