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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016459.1_4506_4621_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4506 - 4621

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTACGCTGT

5'SS Class:

major

3'SS Sequence:

TGCTTTCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

CAGTCCCCATGG

Flanking Amino Acid:

CSGGELFDRIEPDIGMPEPE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

61.2

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

82.7

0.74

0.8

77.3

31.5

Minor 5ss

-0.5

3.2

64.6

46.8

Minor BPS

36.5

-1.1

2.1

37.24

44.7

Associated Gene:

Gene:

CHEK1

Ensembl Gene ID:

ENSAPLG00000014973

Chromosome:

PEDO01016459.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015624

625 - 4853

4229