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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016459.1_905_1087_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

905 - 1087

Intron Length:

183

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGGCAC

U12 Branch Point Sequence:

AGGCACCGAGCC

Flanking Amino Acid:

KILVDFRLSKGDGLEFKRHF

Intron Amino Acid Position:

405

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.9

35.3

Major BPS

43.4

-0.4

1.3

46.8

37.9

Major PPT

77.5

0.62

0.9

72.5

32.1

Minor 5ss

28.5

-2.5

3.4

40.8

45.6

Minor BPS

37.1

-1

1.8

42.58

36.9

Associated Gene:

Gene:

CHEK1

Ensembl Gene ID:

ENSAPLG00000014973

Chromosome:

PEDO01016459.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015624

625 - 4853

4229