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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016465.1_2126_2212_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
2126 - 2212

Intron Length:
87

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACGCGGG

5'SS Class:
major

3'SS Sequence:
TTCTTGTCCACAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TCCCTAT

U12 Branch Point Sequence:
GTTTCCCTATCT

Flanking Amino Acid:
PQEVLEMRNKIREQNRQDVK

Intron Amino Acid Position:
428

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.8
0.63
1.1
58.2
46.8

Major BPS
56.2
0.15
1.3
54.7
42.5

Major PPT
80.9
0.7
0.8
75.8
32.8

Minor 5ss
34.7
-1.7
3.5
46.9
48.5

Minor BPS
64.1
0.52
2
85.92
39.8

Associated Gene:

Gene:
ADD2

Ensembl Gene ID:

Chromosome:
PEDO01016465.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 5277
5257

21 - 5277
5257