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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016465.1_3824_3924_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
3824 - 3924

Intron Length:
101

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGGGTTTG

5'SS Class:
strong_major

3'SS Sequence:
CCTGGTGCTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTGAT

U12 Branch Point Sequence:
CTCTGCTGATGC

Flanking Amino Acid:
LQKCLGPTCKILVLRNHGVL

Intron Amino Acid Position:
210

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.5
0.77
0.9
74.8
38.1

Major BPS
76.2
0.65
1.1
65.3
43.7

Major PPT
68.7
0.42
1
61
40.2

Minor 5ss
37
-1.5
3.2
48.2
47.9

Minor BPS
40.8
-0.7
2.2
50.27
46.5

Associated Gene:

Gene:
ADD2

Ensembl Gene ID:

Chromosome:
PEDO01016465.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 5277
5257

21 - 5277
5257