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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016465.1_4306_4391_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
4306 - 4391

Intron Length:
86

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTGAGCGTG

5'SS Class:
major

3'SS Sequence:
ATCCCCACTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCTGAG

U12 Branch Point Sequence:
GTATCCCCACTG

Flanking Amino Acid:
ACSEVTAASLIKVNVLGDVV

Intron Amino Acid Position:
112

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77
0.64
1
64.9
41.1

Major BPS
55.1
0.13
1.5
54.7
43.1

Major PPT
70.7
0.47
0.9
63.2
32.1

Minor 5ss
34.6
-1.7
3.4
43.3
45.4

Minor BPS
43.2
-0.6
2.1
50.26
43.6

Associated Gene:

Gene:
ADD2

Ensembl Gene ID:

Chromosome:
PEDO01016465.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 5277
5257

21 - 5277
5257