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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016473.1_1157_1573_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1157 - 1573

Intron Length:

417

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCCCATTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

TCCTCTCCCATT

Flanking Amino Acid:

LAVFRNTTDMEHLNEGIQQD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

0.42

1.1

57.3

41.7

Major PPT

76.1

0.59

0.8

37.2

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

42.3

-0.5

2.1

59.92

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026173

Chromosome:

PEDO01016473.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028858

378 - 2689

2312