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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016473.1_1161_1299_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1161 - 1299

Intron Length:

139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTGAAGAGT

5'SS Class:

major

3'SS Sequence:

AAGGAGGTAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

TTTATACTAAGG

Flanking Amino Acid:

AVFRNTTDMVRLNHHQKGFG

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.4

65.6

39.9

Major BPS

75.1

0.62

65.6

Major PPT

48.2

-0.1

1.1

35.9

43.8

Minor 5ss

29.6

-2.3

3.3

39.2

40.7

Minor BPS

44.3

-0.5

2.2

57.73

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026173

Chromosome:

PEDO01016473.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028363

485 - 2657

2173