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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016473.1_1347_1615_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1347 - 1615

Intron Length:

269

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTG|GCATTGGAA

5'SS Class:

weak_major

3'SS Sequence:

CAGCAAGGACAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTAAAT

U12 Branch Point Sequence:

TCCAGCAGGACA

Flanking Amino Acid:

KGFGGPFPPLLIVWIGLKVS

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.5

0.23

1.3

51.2

42.9

Major BPS

0.5

1.1

76.9

32.8

Major PPT

42.7

-0.4

1.1

27.2

34.8

Minor 5ss

24.5

-2.9

4.2

33.9

44.2

Minor BPS

-0.7

2.1

48.68

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026173

Chromosome:

PEDO01016473.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028363

485 - 2657

2173