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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016493.1_3634_3847_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3634 - 3847

Intron Length:

214

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGCAAA

5'SS Class:

major

3'SS Sequence:

TTTATTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAC

U12 Branch Point Sequence:

ACTGCCTTTATT

Flanking Amino Acid:

LEVTAGRTTGGDICQQFTKE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.3

74.1

38.3

Major BPS

69.1

0.48

32.1

Major PPT

89.3

0.88

0.7

27.8

Minor 5ss

34.1

-1.8

2.7

45.6

Minor BPS

59.8

0.39

1.8

73.77

43.4

Associated Gene:

Gene:

MTRF1

Ensembl Gene ID:

ENSAPLG00000009317

Chromosome:

PEDO01016493.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009722

2730 - 9950

7221