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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016493.1_3956_4046_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3956 - 4046

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTACCGAAG

5'SS Class:

major

3'SS Sequence:

CTTGCCTCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

TGTTTGTCACAC

Flanking Amino Acid:

DVLNYTPAEIGGLHHAAAHI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.8

0.4

1.2

60.7

45.5

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

0.65

0.8

69.6

36.7

Minor 5ss

36.1

-1.6

3.3

47.9

47.8

Minor BPS

-0.7

2.3

56.07

42.2

Associated Gene:

Gene:

MTRF1

Ensembl Gene ID:

ENSAPLG00000009317

Chromosome:

PEDO01016493.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009722

2730 - 9950

7221