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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016493.1_5378_6545_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5378 - 6545

Intron Length:

1168

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTGTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CTCTCTTGAATT

Flanking Amino Acid:

SAVRIVHLPTGLVVECQQER

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

77.8

38.7

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

72.3

0.5

1.1

74.3

34.3

Minor 5ss

32.4

-2

40.4

45.7

Minor BPS

0.55

1.4

76.06

41.4

Associated Gene:

Gene:

MTRF1

Ensembl Gene ID:

ENSAPLG00000009317

Chromosome:

PEDO01016493.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009722

2730 - 9950

7221