Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016507.1_10724_11241_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10724 - 11241

Intron Length:

518

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTTGG

5'SS Class:

major

3'SS Sequence:

TTGTGTGTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

TTAACTGTAACA

Flanking Amino Acid:

CHDDSRLTESVDVLMPNVGE

Intron Amino Acid Position:

429

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

43.9

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

74.6

0.55

69.5

41.6

Minor 5ss

42.5

-0.8

2.8

59.2

45.2

Minor BPS

57.7

0.24

72.83

39.1

Associated Gene:

Gene:

NARS1

Ensembl Gene ID:

ENSAPLG00000015701

Chromosome:

PEDO01016507.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016426

1954 - 13179

11226