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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016549.1_1709_2025_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1709 - 2025

Intron Length:
317

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACGCTGG

5'SS Class:
major

3'SS Sequence:
GCTGTGGGTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GGCTGAT

U12 Branch Point Sequence:
GGTTTTGGCACA

Flanking Amino Acid:
AQADLAYQLQVARTKQQIEE

Intron Amino Acid Position:
101

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.6
0.65
1.1
60.8
46.5

Major BPS
58.4
0.21
1.4
51.1
46.3

Major PPT
60.8
0.24
1.1
53.2
45.9

Minor 5ss
42.2
-0.9
3.1
56
48.2

Minor BPS
39.8
-0.8
2.3
52.81
39.5

Associated Gene:

Gene:
FLOT1

Ensembl Gene ID:

Chromosome:
PEDO01016549.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

579 - 5110
4532