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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016549.1_18477_18557_R

Intron Information:

Intron Rank:

155521

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

18477 - 18557

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-CG

5'SS Sequence:

CAG|GCGGCCAGC

5'SS Class:

major

3'SS Sequence:

ACAGCGCGCGGCG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACATGAT

U12 Branch Point Sequence:

ACATGATGAAGG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.2

0.36

1.2

59.6

42.2

Major BPS

63.3

0.33

1.1

53.7

41.6

Major PPT

24.1

-1.5

3.2

27.3

Minor 5ss

28.1

-2.5

42.5

44.6

Minor BPS

38.5

-1

2.2

40.59

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031168

Chromosome:

PEDO01016549.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039400

17799 - 21046

3248