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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016549.1_24818_24880_F

Intron Information:

Intron Rank:

126652

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

24818 - 24880

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGTGGCC

5'SS Class:

major

3'SS Sequence:

GGACGGTGGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGGCAC

U12 Branch Point Sequence:

CCTGGCACACCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.1

56.6

36.6

Major BPS

45.1

-0.3

1.4

52.4

43.3

Major PPT

47.7

-0.1

1.2

34.5

45.3

Minor 5ss

23.7

-3

3.5

32.8

42.5

Minor BPS

35.4

-1.1

2.2

43.55

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018267

Chromosome:

PEDO01016549.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031430

24047 - 26669

2623