Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016549.1_4311_4409_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4311 - 4409

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTGGGGG

5'SS Class:

major

3'SS Sequence:

CTGTCCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

CCCTCCTCACTT

Flanking Amino Acid:

EALTGVSVTQAAQKKSDCVA

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.33

1.3

51.3

45.5

Major BPS

72.4

0.56

73.5

32.5

Major PPT

74.9

0.56

0.8

69.3

31.3

Minor 5ss

30.1

-2.3

3.3

38.2

46.8

Minor BPS

1.9

63.16

47.6

Associated Gene:

Gene:

FLOT1

Ensembl Gene ID:

ENSAPLG00000022603

Chromosome:

PEDO01016549.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042295

579 - 5110

4532