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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016583.1_1286_3678_R

Intron Information:

Intron Rank:

139457

Intron Class:

major

Intron Phase:

Intron Coordinates:

1286 - 3678

Intron Length:

2393

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TACTTATTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATCGTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

83.5

27.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

83.9

0.76

0.8

81.3

34.9

Minor 5ss

38.5

-1.3

2.8

50.4

39.3

Minor BPS

70.9

0.73

88.75

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022511

Chromosome:

PEDO01016583.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047432

1228 - 5361

4134