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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016594.1_12889_12998_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12889 - 12998

Intron Length:

110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTGAGTCCC

5'SS Class:

major

3'SS Sequence:

CCTCCGCTCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAC

U12 Branch Point Sequence:

CCGCCTTTGACG

Flanking Amino Acid:

ETPTVSQLVAKPQAPNSGVE

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

59.9

39.3

Major BPS

74.1

0.6

66.7

39.9

Major PPT

71.2

0.48

0.8

64.3

30.9

Minor 5ss

32.2

-2

2.9

42.7

37.7

Minor BPS

53.6

-0

1.4

51.16

43.9

Associated Gene:

Gene:

POU6F1

Ensembl Gene ID:

ENSAPLG00000017700

Chromosome:

PEDO01016594.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018564

11906 - 13647

1742