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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016594.1_13174_13300_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13174 - 13300

Intron Length:

127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGGCA

5'SS Class:

major

3'SS Sequence:

GCTGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCACAA

U12 Branch Point Sequence:

GCCCCCACAACG

Flanking Amino Acid:

GPAYSQSAICRFEKLDITPK

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.38

1.2

57.8

41.5

Major BPS

47.4

-0.1

52.5

32.6

Major PPT

69.3

0.43

0.9

34.8

Minor 5ss

-1.8

3.7

47.9

47.7

Minor BPS

45.1

-0.5

1.9

47.08

45.2

Associated Gene:

Gene:

POU6F1

Ensembl Gene ID:

ENSAPLG00000017700

Chromosome:

PEDO01016594.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018564

11906 - 13647

1742