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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016594.1_18116_18791_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18116 - 18791

Intron Length:

676

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTGGC

5'SS Class:

major

3'SS Sequence:

CCTCTCTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATGAA

U12 Branch Point Sequence:

ATGCCTGTCACC

Flanking Amino Acid:

EARCSLGAERCDVLALPIFK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

1.1

65.5

39.9

Major BPS

58.9

0.22

49.8

35.1

Major PPT

86.1

0.81

0.7

83.7

24.4

Minor 5ss

31.8

-2.1

3.4

40.2

41.3

Minor BPS

44.3

-0.4

2.3

57.54

41.6

Associated Gene:

Gene:

TFCP2

Ensembl Gene ID:

ENSAPLG00000012157

Chromosome:

PEDO01016594.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012736

18078 - 27471

9394