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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016594.1_21992_22397_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21992 - 22397

Intron Length:

406

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGGCGC

5'SS Class:

major

3'SS Sequence:

TTTTCCTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTGAC

U12 Branch Point Sequence:

CCACCTGTGACC

Flanking Amino Acid:

PSYETTILTECSPWPEITYV

Intron Amino Acid Position:

249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

54.8

39.4

Major BPS

0.22

1.2

52.4

43.3

Major PPT

92.2

0.95

0.6

84.9

29.9

Minor 5ss

24.3

-3

3.3

32.3

42.6

Minor BPS

45.3

-0.3

51.11

40.5

Associated Gene:

Gene:

TFCP2

Ensembl Gene ID:

ENSAPLG00000012157

Chromosome:

PEDO01016594.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012736

18078 - 27471

9394