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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016594.1_24664_25751_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24664 - 25751

Intron Length:

1088

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCCTCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAG

U12 Branch Point Sequence:

AGGCGCTGAGGC

Flanking Amino Acid:

DGDTVTSTFFVYHAIYLEEL

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

70.8

39.4

Major BPS

-0.2

1.6

40.4

42.3

Major PPT

0.63

0.7

72.3

25.7

Minor 5ss

32.3

-2

3.6

48.7

Minor BPS

36.4

-1

39.97

38.9

Associated Gene:

Gene:

TFCP2

Ensembl Gene ID:

ENSAPLG00000012157

Chromosome:

PEDO01016594.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012736

18078 - 27471

9394