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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016594.1_26317_26433_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26317 - 26433

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTAAG

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

GTCTCATGAGCT

Flanking Amino Acid:

ESCFVLDTMKAETNDSYHII

Intron Amino Acid Position:

457

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

75.7

35.3

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

88.3

0.86

0.7

83.5

24.7

Minor 5ss

35.7

-1.6

2.6

41.1

45.5

Minor BPS

49.2

0.02

71.31

44.8

Associated Gene:

Gene:

TFCP2

Ensembl Gene ID:

ENSAPLG00000012157

Chromosome:

PEDO01016594.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012736

18078 - 27471

9394