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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016594.1_52778_53742_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52778 - 53742

Intron Length:

965

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TCGTTGTTGATG

Flanking Amino Acid:

AEVCHRQYQKVPRIILWLMV

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.9

35.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

71.7

0.49

0.8

62.2

34.7

Minor 5ss

28.5

-2.5

3.4

40.8

45.6

Minor BPS

47.2

-0.3

2.1

52.73

43.3

Associated Gene:

Gene:

SLC11A2

Ensembl Gene ID:

ENSAPLG00000007275

Chromosome:

PEDO01016594.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007620

50684 - 62586

11903