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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016594.1_53850_54549_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53850 - 54549

Intron Length:

700

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTCGG

5'SS Class:

major

3'SS Sequence:

TCACCGCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

GGTTCATCAGCT

Flanking Amino Acid:

AIAINLLSMGKIPLWGGVLI

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

62.5

43.8

Major BPS

72.7

0.56

30.1

Major PPT

69.6

0.44

0.9

61.9

34.5

Minor 5ss

29.9

-2.3

2.8

32.6

35.8

Minor BPS

48.9

71.88

Associated Gene:

Gene:

SLC11A2

Ensembl Gene ID:

ENSAPLG00000007275

Chromosome:

PEDO01016594.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007620

50684 - 62586

11903