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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016594.1_54621_54700_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54621 - 54700

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAATTCCT

5'SS Class:

major

3'SS Sequence:

TTTCTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

CCCTCCCGAGCA

Flanking Amino Acid:

TFVFLFLDKYGLRKLEAFFG

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

1.1

68.5

42.1

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

92.7

0.96

0.6

88.4

21.2

Minor 5ss

37.4

-1.4

52.7

43.6

Minor BPS

44.1

-0.4

52.64

45.3

Associated Gene:

Gene:

SLC11A2

Ensembl Gene ID:

ENSAPLG00000007275

Chromosome:

PEDO01016594.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007620

50684 - 62586

11903