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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016594.1_57924_61508_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57924 - 61508

Intron Length:

3585

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGCGTC

5'SS Class:

strong_major

3'SS Sequence:

TTGCCTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CAGCCCTGACCC

Flanking Amino Acid:

GVSFLACGKTQQLGFAMRPE

Intron Amino Acid Position:

539

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

70.9

39.9

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

81.7

0.71

0.8

73.3

37.1

Minor 5ss

41.4

-1

3.4

59.7

45.1

Minor BPS

47.5

-0.2

1.8

53.92

43.5

Associated Gene:

Gene:

SLC11A2

Ensembl Gene ID:

ENSAPLG00000007275

Chromosome:

PEDO01016594.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007620

50684 - 62586

11903