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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016606.1_4372_4691_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4372 - 4691

Intron Length:

320

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CCCTCTCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACGCAT

U12 Branch Point Sequence:

CCCACGTTGAGC

Flanking Amino Acid:

SGLLLVKTQQVHLLPPDMSC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.7

81.3

32.8

Major BPS

49.9

-0

1.3

37.5

Major PPT

76.3

0.59

0.8

32.1

Minor 5ss

30.9

-2.2

3.2

39.6

46.4

Minor BPS

41.4

-0.6

2.3

45.46

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020557

Chromosome:

PEDO01016606.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022299

4270 - 5472

1203