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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016608.1_903_1298_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

903 - 1298

Intron Length:

396

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGT|GCAGGTGAG

5'SS Class:

major

3'SS Sequence:

GCCCCGCAATCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCGCAA

U12 Branch Point Sequence:

TGCCCCGCAATC

Flanking Amino Acid:

ALKIDLTEARVVSPSGWGQG

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.6

0.25

1.4

58.6

43.3

Major BPS

44.4

-0.3

1.3

48.9

36.6

Major PPT

54.5

0.1

51.2

37.1

Minor 5ss

22.3

-3.2

4.1

30.8

43.2

Minor BPS

45.5

-0.3

2.2

56.76

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027435

Chromosome:

PEDO01016608.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033991

472 - 1380

909