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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016617.1_3493_3602_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3493 - 3602

Intron Length:

110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAGGTCCA

5'SS Class:

major

3'SS Sequence:

CCCCTCTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGGACAC

U12 Branch Point Sequence:

ACCACGCGGACA

Flanking Amino Acid:

VTGLLVAVLVGLSIVIGKLL

Intron Amino Acid Position:

493

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.1

62.9

43.4

Major BPS

42.2

-0.4

1.1

41.8

39.2

Major PPT

72.9

0.52

0.9

67.7

32.3

Minor 5ss

33.6

-1.9

3.1

42.5

44.2

Minor BPS

36.5

-1

2.2

42.73

38.6

Associated Gene:

Gene:

SLC4A2

Ensembl Gene ID:

ENSAPLG00000018161

Chromosome:

PEDO01016617.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041208

965 - 4346

3382