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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016677.1_1452_2356_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1452 - 2356

Intron Length:
905

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGG|GTCAGTAAA

5'SS Class:
major

3'SS Sequence:
GTGTCTCCCGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTGAG

U12 Branch Point Sequence:
CTCTGCTGAGCA

Flanking Amino Acid:
CPAGTFLNRTDPYTCQACGA

Intron Amino Acid Position:
156

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.3
0.55
1.3
74.1
38.3

Major BPS
52.2
0.06
1.6
51.1
46.3

Major PPT
72.2
0.5
0.9
66.1
35.8

Minor 5ss
30
-2.3
2.4
25.9
36.2

Minor BPS
46.6
-0.2
2.1
59.78
46.1

Associated Gene:

Gene:
TAS1R1

Ensembl Gene ID:

Chromosome:
PEDO01016677.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

327 - 3759
3433