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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016683.1_2276_2473_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2276 - 2473

Intron Length:

198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCTTCT

5'SS Class:

weak_major

3'SS Sequence:

TGTTTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GAACTTTTAATG

Flanking Amino Acid:

KYIKGPSVSKREREKFDEEI

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

1.1

74.1

37.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

90.6

0.91

0.7

88.7

28.3

Minor 5ss

65.7

0.53

1.9

77.2

37.8

Minor BPS

53.6

-0

1.3

51.24

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006287

Chromosome:

PEDO01016683.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006525

398 - 2552

2155