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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016683.1_504_1062_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

504 - 1062

Intron Length:

559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTTGATGTC

5'SS Class:

major

3'SS Sequence:

CTTCTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

GTGTGAATGATT

Flanking Amino Acid:

DYRIRVGKDIGYPVRKQCYQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.3

0.36

1.2

39.5

Major BPS

74.5

0.61

79.6

29.1

Major PPT

92.7

0.96

0.6

91.6

19.6

Minor 5ss

31.6

-2.1

3.4

43.7

44.1

Minor BPS

42.5

-0.5

2.2

61.76

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006287

Chromosome:

PEDO01016683.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006525

398 - 2552

2155