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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016688.1_1488_1821_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1488 - 1821

Intron Length:

334

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGA|GCAGGAAGA

5'SS Class:

weak_major

3'SS Sequence:

CGACCCCCACAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTACGAC

U12 Branch Point Sequence:

ACTACGACGACC

Flanking Amino Acid:

KKRVGEGGGRTPASPVVHIR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.2

0.19

1.3

56.1

40.7

Major BPS

45.9

-0.2

1.3

41.9

38.7

Major PPT

48.5

-0

42.8

Minor 5ss

22.4

-3.2

3.9

26.9

37.6

Minor BPS

38.9

-0.8

2.3

50.13

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019672

Chromosome:

PEDO01016688.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019682

1 - 1890

1890