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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016696.1_1766_2276_F

Intron Information:

Intron Rank:

128210

Intron Class:

major

Intron Phase:

Intron Coordinates:

1766 - 2276

Intron Length:

511

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAGGTAAA

5'SS Class:

major

3'SS Sequence:

TTCTCGTCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCCCAC

U12 Branch Point Sequence:

CGGGGCCCACCG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.3

74.1

38.3

Major BPS

41.9

-0.5

1.3

43.8

40.8

Major PPT

78.9

0.65

0.8

76.7

Minor 5ss

-1.7

40.5

39.3

Minor BPS

30.6

-1.6

2.1

28.29

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019050

Chromosome:

PEDO01016696.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025878

478 - 2488

2011