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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016715.1_1175_1262_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1175 - 1262

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CTGTCCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCCAG

U12 Branch Point Sequence:

CCGCTCCCAGCC

Flanking Amino Acid:

TNDGILRTAKGLDYETRNRY

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.8

43.8

Major BPS

44.5

-0.3

1.6

55.8

41.7

Major PPT

75.8

0.58

0.8

66.3

35.8

Minor 5ss

-2.2

3.2

46.1

Minor BPS

37.8

-0.9

1.8

40.07

39.4

Associated Gene:

Gene:

CDH1

Ensembl Gene ID:

ENSAPLG00000003035

Chromosome:

PEDO01016715.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018267

3 - 2629

2627

ENSAPLT00000003106

3 - 2617

2615