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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016715.1_119_354_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

119 - 354

Intron Length:

236

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCCCCCACACAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTTGAC

U12 Branch Point Sequence:

CCTGCCTTGACC

Flanking Amino Acid:

TNWTVEIFGQDSLVLKLKKE

Intron Amino Acid Position:

474

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.9

33.5

Major BPS

61.6

0.29

1.1

54.6

40.8

Major PPT

52.4

0.06

50.4

31.6

Minor 5ss

33.9

-1.8

3.5

49.9

46.5

Minor BPS

67.4

0.53

1.5

69.25

43.1

Associated Gene:

Gene:

CDH1

Ensembl Gene ID:

ENSAPLG00000003035

Chromosome:

PEDO01016715.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003106

3 - 2617

2615