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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016715.1_139_350_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

139 - 350

Intron Length:

212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGCTGTGG

5'SS Class:

major

3'SS Sequence:

CCTTGACCCCAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTTGAC

U12 Branch Point Sequence:

CCTGCCTTGACC

Flanking Amino Acid:

NWTVEIFGQGSPVSPTQDSL

Intron Amino Acid Position:

468

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.1

50.4

42.8

Major BPS

61.6

0.29

1.1

54.6

40.8

Major PPT

0.16

53.1

Minor 5ss

29.7

-2.3

3.3

38.4

46.6

Minor BPS

67.4

0.53

1.5

69.25

43.1

Associated Gene:

Gene:

CDH1

Ensembl Gene ID:

ENSAPLG00000003035

Chromosome:

PEDO01016715.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018267

3 - 2629

2627