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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016715.1_1443_1543_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1443 - 1543

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACCGAGC

5'SS Class:

weak_major

3'SS Sequence:

CCCGCAGTACGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

CCTCCCGCAGTA

Flanking Amino Acid:

DNIPIFDPTMGTVPENEVGL

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.4

0.2

1.2

51.6

45.3

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

43.8

-0.3

1.7

Minor 5ss

37.2

-1.4

3.4

48.9

42.3

Minor BPS

39.8

-0.7

2.2

48.52

42.6

Associated Gene:

Gene:

CDH1

Ensembl Gene ID:

ENSAPLG00000003035

Chromosome:

PEDO01016715.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003106

3 - 2617

2615