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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016715.1_1449_1543_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1449 - 1543

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACCGAGC

5'SS Class:

weak_major

3'SS Sequence:

GCCCCTCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

CCCGCGCTGACC

Flanking Amino Acid:

DNIPIFDPTMYEGTVPENEV

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.4

0.2

1.2

51.6

45.3

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

67.8

0.4

0.8

29.2

Minor 5ss

37.2

-1.4

3.4

48.9

42.3

Minor BPS

39.9

-0.8

2.3

45.52

43.9

Associated Gene:

Gene:

CDH1

Ensembl Gene ID:

ENSAPLG00000003035

Chromosome:

PEDO01016715.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035220

183 - 2650

2468