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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016715.1_1631_1732_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1631 - 1732

Intron Length:

102

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCG|GCACCCCCA

5'SS Class:

weak_major

3'SS Sequence:

GGCCACGGACCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGCTGAT

U12 Branch Point Sequence:

TACACGCTGATC

Flanking Amino Acid:

DREVGARPRPGGLGALPPML

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.4

0.1

1.4

45.6

43.8

Major BPS

63.8

0.34

1.2

54.7

43.1

Major PPT

48.2

-0.1

1.1

35.5

39.9

Minor 5ss

32.8

-2

4.2

48.4

47.3

Minor BPS

41.8

-0.6

2.2

51.82

39.6

Associated Gene:

Gene:

CDH1

Ensembl Gene ID:

ENSAPLG00000003035

Chromosome:

PEDO01016715.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018267

3 - 2629

2627